Journal Papers
- Landman MS, Jiang J*, Zhang J, Ren W (2024) Augmented flexible Krylov subspace methods with applications to Bayesian inverse problems, Linear Algebra and its Applications
- Shen S#, Li L#, Gao S, Wang Y, Gu L, Li S, Zhu X, Jiang J*, Yu J*, Ren W* (2024) High Resolution Diffuse Optical Tomography via Neural Fields, IEEE Transactions on Computational Imaging
- Wu Y, Hu Y, Li L, Zhu X, Gu L, Jiang J, Ren W* (2024) Simultaneous reconstruction of 3D fluorescence distribution and object surface using structured light illumination and dual-camera detection. Optics Express 32(7)
- Wang J, Pan B, Wang Z, Zhang J, Zhou Z, Yao L, Wu Y, Ren W, Wang J, Ji H, Yu J*, Chen B* (2024) Single-pixel p-graded-n junction spectrometers. Nat Commun 15: 1773
- Wu Y, Li F, Wu Y, Wang H, Gu L, Zhang J, Qi Y, Meng L, Kong N, Chai Y, Hu Q, Xing Z, Ren W*, Li F*, Zhu X* (2024) Lanthanide luminescence nanothermometer with working wavelength beyond 1500 nm for cerebrovascular temperature imaging in vivo. Nat Commun 15: 2341
- Zhang J, Wang Z, Cao T, Cao G*, Ren W*, Jiang J* (2024) Robust residual-guided iterative reconstruction for sparse-view CT in small animal imaging. Physics in Medicine & Biology
- Gao S, Zhang J, Hu Y, Wu Y, Li L, Hu Q, Lou X, Zhu X, Jiang J*, Ren W* (2023), Multifunctional Optical Tomography System with High-fidelity Surface Extraction based on a Single Programmable Scanner and Unified Pinhole Modeling, IEEE Transactions on Biomedical Engineering, 1-13
- Zhu X, Gu L, Li R, Chen L, Chen, J, Zhou N*, Ren W* (2023), MiniMounter: a low‐cost miniaturized microscopy development toolkit for image quality control and enhancement. Journal of Biophotonics, e202300214
- Ren W* Dean-Ben Xl, Skachokova Z, Augath M, Ni R, Chen Z, Razansky D* (2023) Monitoring mouse brain perfusion with hybrid magnetic resonance optoacoustic tomography. Biomed Opt Express 14: 1192-1204
- Ren W*, Li L, Zhang J, Vaas M, Klohs J, Ripoll J, Wolf M, Ni R, Rudin M (2022) Non-invasive visualization of amyloid-beta deposits in Alzheimer amyloidosis mice using magnetic resonance imaging and fluorescence molecular tomography. Biomed Opt Express 13: 3809-3822
- Ren W*, Ji B, Guan Y, Cao L, Ni R* (2022) Recent Technical Advances in Accelerating the Clinical Translation of Small Animal Brain Imaging: Hybrid Imaging, Deep Learning, and Transcriptomics. Front Med (Lausanne) 9: 771982
- Hu Y, Lafci B, Luzgin A, Wang H, Klohs J, Dean-Ben XL, Ni R, Razansky D*, Ren W* (2022) Deep learning facilitates fully automated brain image registration of optoacoustic tomography and magnetic resonance imaging. Biomed Opt Express 13: 4817-4833
- Chen Z, Gezginer I, Augath MA, Ren W, Liu YH, Ni R, Dean-Ben XL, Razansky D* (2022) Hybrid magnetic resonance and optoacoustic tomography (MROT) for preclinical neuroimaging. Light Sci Appl 11: 332
- Zhou R, Ji B, Kong Y, Qin L, Ren W, Guan Y, Ni R* (2021) PET Imaging of Neuroinflammation in Alzheimer's Disease. Front Immunol 12: 739130
- Ren W, Dean-Ben XL, Augath MA, Razansky D* (2021) Development of concurrent magnetic resonance imaging and volumetric optoacoustic tomography: A phantom feasibility study. J Biophotonics 14: e202000293
- Ren W, Cui S, Alini M, Grad S, Zhou Q, Li Z, Razansky D* (2021) Noninvasive multimodal fluorescence and magnetic resonance imaging of whole-organ intervertebral discs. Biomed Opt Express 12: 3214-3227
- Ren W*, Jiang J, Costanzo Mata AD, Kalyanov A, Ripoll J, Lindner S, Charbon E, Zhang C, Rudin M, Wolf M (2020) Multimodal imaging combining time-domain near-infrared optical tomography and continuous-wave fluorescence molecular tomography. Opt Express 28: 9860-9874
- Ren W, Isler H, Wolf M, Ripoll J, Rudin M* (2020) Smart Toolkit for Fluorescence Tomography: Simulation, Reconstruction, and Validation. IEEE Trans Biomed Eng 67: 16-26
- Liu Y, Ren W*, Ammari H (2020) Robust reconstruction of fluorescence molecular tomography with an optimized illumination pattern. Inverse Problems & Imaging 14: 535-568
- Ren W, Skulason H, Schlegel F, Rudin M, Klohs J, Ni R* (2019) Automated registration of magnetic resonance imaging and optoacoustic tomography data for experimental studies. Neurophotonics 6: 025001
- Ni R, Vaas M, Ren W, Klohs J* (2018) Noninvasive detection of acute cerebral hypoxia and subsequent matrix-metalloproteinase activity in a mouse model of cerebral ischemia using multispectral-optoacoustic-tomography. Neurophotonics 5: 015005
- Ren W, Elmer A, Buehlmann D, Augath M-A, Vats D, Ripoll J, Rudin M* (2016) Dynamic Measurement of Tumor Vascular Permeability and Perfusion using a Hybrid System for Simultaneous Magnetic Resonance and Fluorescence Imaging. Mol Imaging Biol 18: 191-200
Proceeding papers
- Li L, Shen S, Gao S, Wang Y, Gu L, Li S, Zhu X, Jiang J, Yu J, Ren W* (2023) A self-supervised learning approach for high-resolution diffuse optical tomography using neural fields, BPC 2023, SPIE Proceeding
- Wu Y, Gao S, Li L, Zhang J, Hu Q, Lou X, Zhu X, Jiang J, Ren W* (2023) Multifunctional optical tomography system combining surface extraction and 3D fluorescence reconstruction, BPC 2023, SPIE Proceeding
- Zhu X, Gu L, Li R, Chen L, Chen J, Zhou N, Ren W* (2023) Multi-functional accessory toolkit for Miniscope prototyping and image enhancement, , BPC 2023, SPIE Proceeding
- Hu Y, Lafci B, Luzgin A, Wang H, Klohs J, Dean-Ben XL, Ni R, Razansky D, Ren W* (2022) Automatic image registration of optoacoustic tomography and magnetic resonance imaging based on deep learning. Proc. SPIE, First Conference on Biomedical Photonics and Cross-Fusion, 1246103, doi: doi.org/10.1117/12.2655214
- Ren W, Dean-Ben XL, Augath M, Razansky D* (2021) Feasibility study on concurrent optoacoustic tomography and magnetic resonance imaging. Proc. SPIE, doi: (oral & Best Paper Nomination in SPIE Photonics West, ranking top 5%)
- Ren W*, Jiang J, Di Costanzo MA, Kalyanov A, Ripoll J, Lindner S, Charbon S, Zhang C, Rudin M, Wolf M (2020) Time-domain Near Infrared Optical Tomography Guided Fluorescence Molecular Tomography, Biophotonics Congress: Biomedical Optic. OSA
- Jiang J, Ren W, Isler H, Kalyanov A, Lindner S, Mata Aldo D. C, Rudin M, Wolf M* (2020), Validation and Comparison of Monte Carlo and Finite Element Method in Forward Modeling for Near Infrared Optical Tomography. In Oxygen Transport to Tissue XLI (pp. 307-313). Springer, Charm
- Polatoglu M N, Liu Y, Ni R, Ripoll J, Rudin M, Wolf M, Ren W* (2019), Simulation of fluorescence molecular tomography using a registered digital mouse atlas, Proc. SPIE, doi: /10.1117/12.2525366
- Ren W, Skulason H, Schlegel F, Rudin M, Klohs J, Ni R* (2019), Automated registration for optoacoustic tomography and MRI, In Optical Molecular Probes, Imaging and Drug Delivery. OSA
- Ni R, Vaas M, Ren W, Klohs J* (2018), Non-invasive detection of matrix-metalloproteinase activity in a mouse model of cerebral ischemia using multispectral optoacoustic tomography, Proc. SPIE, doi: 10.1117/12.2286313
- Ren W, Elmer A, Augath M, Rudin M* (2016), FEM-based Simulation of a Fluorescence Tomography Experiment using Anatomical MR Images, Proc. SPIE, doi:10.1117/12.2216454
- Ren W, Valastyán I, Colarieti-Tosti M* (2012), Stationary SPECT with multi-layer Multiple-Pinhole-Arrays, IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), doi: 10.1109/NSSMIC.2012.6551593
- Valastyán I*, Colarieti-Tostia M, Ren W, Turco, A, Kereka A (2012), Monte Carlo simulation of a dental Positron Emission Tomograph and image reconstruction of scatter and true coincidence events, IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), doi: 10.1109/NSSMIC.2012.6551795
Patent
- 任无畏, 邾馨怡, 陈亮. 动物显微成像设备. CN118112769A
- 任无畏, 邾馨怡, 顾梁韬. 结合核磁共振和光学的小动物成像系统. CN118161144A
- 任无畏, 吴亚男, 胡叶兴. 同时提取内部荧光分子分布和表面三维结构的成像系统. CN116839500A
- Ren W, Rudin M, Method for selecting an illumination pattern for a fluorescence molecular tomography measurement, (PCT/EP2020/051779)
- 任无畏,吴亚男,胡叶兴,等. 同时提取内部荧光分子分布和表面三维结构的成像系统. CN116839500A
- 任无畏,邾馨怡,陈亮,等. 适用于微型化显微成像的辅助调节系统. CN116661122A
- 任无畏,吴亚男,陈亮. 单相机提取双视角表面信息的光学断层扫描系统. CN116576796A
- 任无畏,高圣宇,吴亚男. 连续波光源非接触式的光学断层扫描系统及扫描方法. CN11519
Book Chapter
- Ren W*, Ni R* (2024) Noninvasive Visualization of Amyloid-Beta Deposits in Alzheimer's Amyloidosis Mice via Fluorescence Molecular Tomography Using Contrast Agent. Biomarkers for Alzheimer’s Disease Drug Development 2785: 271-285